Accurate detection of enhancer-promoter loops from genome-wide chromatin interaction data is critical for understanding gene regulation. Standard normalization methods, such as matrix balancing ...
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Genome-wide chromosome conformation capture methods (such as Hi-C 1) revealed that mammalian genomes are folded into thousands of topologically associating domains (TADs) spanning 100–1,500 kb 2,3,4,5 ...
Python has evolved rapidly in the last several years. Many teams are still running applications on Python 3.9, but Python 3.13 delivers major improvements in speed, developer experience, and future ...
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